{ "_id": "6a10712eacfb0bcc41cabc0c", "Package": "rWSBIM1207", "Type": "Package", "Title": "Companion Package for WSBIM1207 Course", "Version": "0.1.19", "Authors@R": "person(given = \"Laurent\",\nfamily = \"Gatto\",\nrole = c(\"aut\", \"cre\"),\nemail = \"laurent.gatto@uclouvain.be\",\ncomment = c(ORCID = \"0000-0002-1520-2268\"))", "Description": "Companion package for the WSBIM1207 course, distributing\ndata and general documentation, and making course\nadministration easier.", "License": "GPL-2", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.3.1", "Repository": "https://uclouvain-cbio.r-universe.dev", "Date/Publication": "2024-06-15 22:26:54 UTC", "RemoteUrl": "https://github.com/UCLouvain-CBIO/rWSBIM1207", "RemoteRef": "HEAD", "RemoteSha": "3561033e7a99182664a0a20f603382b5539941f0", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-07 06:47:54 UTC", "User": "root" }, "Author": "Laurent Gatto [aut, cre] (ORCID:\n)", "Maintainer": "Laurent Gatto ", "MD5sum": "19c8721822b209d18ad4889f8d01d666", "_user": "uclouvain-cbio", "_type": "src", "_file": "rWSBIM1207_0.1.19.tar.gz", "_fileid": "8b72e0327a45170f20c44cfa86f868dd92e229428f112ad59a65b35dbe36d4d9", "_filesize": 11130602, "_sha256": "8b72e0327a45170f20c44cfa86f868dd92e229428f112ad59a65b35dbe36d4d9", "_created": "2026-05-07T06:47:54.000Z", "_published": "2026-05-22T15:07:26.899Z", "_distro": "noble", "_jobs": [ { "job": 77406671991, "time": 261, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "ERROR", "artifact": "6848705394" }, { "job": 77406673329, "time": 262, "config": "linux-release-x86_64", "r": "4.6.0", "check": "ERROR", "artifact": "6848705537" }, { "job": 77406672354, "time": 131, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "ERROR", "artifact": "6848671578" }, { "job": 77406672850, "time": 156, "config": "macos-release-arm64", "r": "4.6.0", "check": "ERROR", "artifact": "6848677583" }, { "job": 77406671733, "time": 331, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "6848638725" }, { "job": 77406671361, "time": 225, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7163796721" }, { "job": 77406672095, "time": 438, "config": "windows-devel", "r": "4.7.0", "check": "ERROR", "artifact": "6848748626" }, { "job": 77406672342, "time": 408, "config": "windows-oldrel", "r": "4.5.3", "check": "ERROR", "artifact": "6848740548" }, { "job": 77406672167, "time": 446, "config": "windows-release", "r": "4.6.0", "check": "ERROR", "artifact": "6848750538" } ], "_buildurl": "https://github.com/r-universe/uclouvain-cbio/actions/runs/25480335821", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/UCLouvain-CBIO/rWSBIM1207", "_commit": { "id": "3561033e7a99182664a0a20f603382b5539941f0", "author": "Laurent Gatto ", "committer": "Laurent Gatto ", "message": "Merge branch 'master' of github.com:UCLouvain-CBIO/rWSBIM1207\n", "time": 1718490414 }, "_maintainer": { "name": "Laurent Gatto", "email": "laurent.gatto@uclouvain.be", "login": "lgatto", "mastodon": "@lgatto@fediscience.org", "orcid": "0000-0002-1520-2268", "uuid": 384198 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "utils", "role": "Imports" }, { "package": "tibble", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "MSnbase", "role": "Suggests" }, { "package": "Biobase", "role": "Suggests" }, { "package": "SummarizedExperiment", "role": "Suggests" }, { "package": "pRolocdata", "role": "Suggests" }, { "package": "curatedTCGAData", "role": "Suggests" }, { "package": "ALL", "role": "Suggests" }, { "package": "tidyverse", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "readr", "role": "Suggests" } ], "_owner": "uclouvain-cbio", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "lgatto", "count": 77, "uuid": 384198 }, { "user": "aloriot", "count": 1, "uuid": 43926178 } ], "_userbio": { "uuid": 43893288, "type": "organization", "name": "Computational Biology and Bioinformatics at UCLouvain" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/rWSBIM1207" }, "_devurl": "https://github.com/uclouvain-cbio/rwsbim1207", "_searchresults": 8, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/rWSBIM1207.html", "manual.pdf" ], "_cranurl": false, "_exports": [ "apple_mobility.csv", "beers.csv", "beers2.csv", "clinical1.csv", "covid19_cases.csv", "covid19_deaths.csv", "covid19_recovered.csv", "english_education_files", "expression.csv", "expressions.csv", "faillites_be", "interro2.rds", "interroA.csv", "interroB.csv", "kem.tsv", "kem2.tsv", "kem3.tsv", "load_exam_data", "population_be.csv", "road_accidents_be_2022.rds", "road_accidents_be_meta.csv", "rWSBIM1207version", "valentine" ], "_datasets": [ { "name": "beers", "title": "Beer consumption data", "object": "beers", "class": [ "data.frame" ], "fields": [ "Record_ID", "Work", "Consumption", "Gender", "Age", "Day", "Month", "Year" ], "rows": 48, "table": true, "tojson": true }, { "name": "clinical_table_ex1", "title": "TCGA data", "object": "clinical_table_ex1", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "gender", "current smoker", "lifelong non-smoker" ], "rows": 2, "table": true, "tojson": true }, { "name": "clinical1", "title": "TCGA data", "object": "clinical1", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "patientID", "tumor_tissue_site", "gender", "age_at_diagnosis", "vital_status", "days_to_death", "days_to_last_followup", "pathologic_stage", "pathology_T_stage", "pathology_N_stage", "pathology_M_stage", "smoking_history", "number_pack_years_smoked", "year_of_tobacco_smoking_onset", "stopped_smoking_year" ], "rows": 516, "table": true, "tojson": true }, { "name": "clinical2", "title": "TCGA data", "object": "clinical2", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "patientID", "gender", "years_at_diagnosis" ], "rows": 516, "table": true, "tojson": true }, { "name": "expression", "title": "TCGA data", "object": "expression", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "sampleID", "patient", "type", "A1BG", "A1CF", "A2BP1", "A2LD1", "A2ML1" ], "rows": 570, "table": true, "tojson": true }, { "name": "GSE96870_intro", "title": "RNA-seq data from Blackmore et al. 2017", "object": "GSE96870_intro", "class": [ "RangedSummarizedExperiment" ], "fields": [], "table": false, "tojson": false }, { "name": "GSE96870_intro_ranges", "title": "RNA-seq data from Blackmore et al. 2017", "object": "GSE96870_intro_ranges", "class": [ "RangedSummarizedExperiment" ], "fields": [], "table": false, "tojson": false }, { "name": "interroC", "title": "Practice datasets", "object": "interroC", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "id", "interro5", "interro6", "interro7" ], "rows": 15, "table": true, "tojson": true }, { "name": "interroL", "title": "Practice datasets", "object": "interroL", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "id", "height", "gender", "X", "serie", "interro", "result" ], "rows": 820, "table": true, "tojson": true }, { "name": "jdf1", "title": "Data illustrating join operations", "object": "jdf", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "uniprot", "organelle", "entry" ], "rows": 25, "table": true, "tojson": true }, { "name": "jdf2", "title": "Data illustrating join operations", "object": "jdf", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "gene_name", "description", "uniprot", "organism" ], "rows": 25, "table": true, "tojson": true }, { "name": "jdf3", "title": "Data illustrating join operations", "object": "jdf", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "gene_name", "description", "UniProt", "organism" ], "rows": 25, "table": true, "tojson": true }, { "name": "jdf4", "title": "Data illustrating join operations", "object": "jdf", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "uniprot", "organelle", "entry" ], "rows": 10, "table": true, "tojson": true }, { "name": "jdf5", "title": "Data illustrating join operations", "object": "jdf", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "gene_name", "description", "uniprot", "organism" ], "rows": 5, "table": true, "tojson": true }, { "name": "jdf6", "title": "Data illustrating join operations", "object": "jdf", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "uniprot", "organelle", "entry", "isoform" ], "rows": 5, "table": true, "tojson": true }, { "name": "jdf7", "title": "Data illustrating join operations", "object": "jdf", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "gene_name", "description", "uniprot", "organism", "isoform_num", "measure" ], "rows": 5, "table": true, "tojson": true }, { "name": "mvylng", "title": "Data from Mulvey et al. 2015", "object": "mvylng", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "Accession", "markers", "sample", "exprs", "Description", "time", "rep" ], "rows": 42066, "table": true, "tojson": true }, { "name": "peptides", "title": "A vector of peptide sequences", "object": "peptides", "class": [ "character" ], "fields": [], "table": false, "tojson": true } ], "_help": [ { "page": "apple_mobility", "title": "Apple Mobility Data", "topics": [ "apple_mobility", "apple_mobility.csv" ] }, { "page": "beers", "title": "Beer consumption data", "topics": [ "beers", "beers.csv", "beers2.csv" ] }, { "page": "covid", "title": "Coronavirus (COVID-19) Cases", "topics": [ "covid19", "covid19_cases.csv", "covid19_deaths.csv", "covid19_recovered.csv" ] }, { "page": "english_education_files", "title": "TidyTuesday's English Education Data", "topics": [ "english_education", "english_education_files" ] }, { "page": "faillites_be", "title": "Evolution mensuelle des faillites par NACE", "topics": [ "faillites", "faillites_be" ] }, { "page": "GSE96870", "title": "RNA-seq data from Blackmore et al. 2017", "topics": [ "GSE96870", "GSE96870_intro", "GSE96870_intro_ranges" ] }, { "page": "interro", "title": "Practice datasets", "topics": [ "interro", "interro2.rds", "interroA", "interroA.csv", "interroB", "interroB.csv", "interroC", "interroL" ] }, { "page": "join", "title": "Data illustrating join operations", "topics": [ "jdf", "jdf1", "jdf2", "jdf3", "jdf4", "jdf5", "jdf6", "jdf7" ] }, { "page": "kem", "title": "KEM RNA-Seq data", "topics": [ "kem", "kem.tsv", "kem2.tsv", "kem3.tsv", "kem_annot", "kem_count" ] }, { "page": "load_exam_data", "title": "Make and load exam data", "topics": [ "load_exam_data" ] }, { "page": "mvylng", "title": "Data from Mulvey et al. 2015", "topics": [ "mvylng" ] }, { "page": "peptides", "title": "A vector of peptide sequences", "topics": [ "peptides" ] }, { "page": "population", "title": "Belgium population", "topics": [ "population_be.csv" ] }, { "page": "road_accidents", "title": "Road accidents data", "topics": [ "road_accidents_be_2022.rds", "road_accidents_be_meta.csv" ] }, { "page": "rWSBIM1207", "title": "rWSBIM1207: Companion package for WSBIM1207 course", "topics": [ "rWSBIM1207-package", "rWSBIM1207", "rWSBIM1207version" ] }, { "page": "tcga", "title": "TCGA data", "topics": [ "clinical1", "clinical1.csv", "clinical2", "clinical_table_ex1", "expression", "expression.csv", "expressions.csv", "tcga" ] }, { "page": "valentine", "title": "TidyTuesday's Valentine's Day Consumer Data", "topics": [ "gifts_age", "gifts_gender", "historical_spending", "valentin", "valentine" ] } ], "_readme": "https://github.com/UCLouvain-CBIO/rWSBIM1207/raw/HEAD/README.md", "_rundeps": [ "cli", "dplyr", "generics", "glue", "lifecycle", "magrittr", "pillar", "pkgconfig", "R6", "rlang", "tibble", "tidyselect", "utf8", "vctrs", "withr" ], "_score": 1.6989700043360187, "_indexed": true, "_nocasepkg": "rwsbim1207", "_universes": [ "uclouvain-cbio", "lgatto" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.19", "date": "2026-05-07T06:52:09.000Z", "distro": "noble", "commit": "3561033e7a99182664a0a20f603382b5539941f0", "fileid": "989061346b1dbd4b7d58623c1db2be7fbc1e2b7c0676b437ee85d4ccdabf2994", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/uclouvain-cbio/actions/runs/25480335821" }, { "r": "4.6.0", "os": "linux", "version": "0.1.19", "date": "2026-05-07T06:52:13.000Z", "distro": "noble", "commit": "3561033e7a99182664a0a20f603382b5539941f0", "fileid": "6fd3e0a1547764c22672cfebd454c07eeb9ef09fd51fa88eb3a2e90777f10cd0", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/uclouvain-cbio/actions/runs/25480335821" }, { "r": "4.5.3", "os": "mac", "version": "0.1.19", "date": "2026-05-07T06:50:14.000Z", "commit": "3561033e7a99182664a0a20f603382b5539941f0", "fileid": "5ccaad0a12fbba4aebf54ab488f902933238909b0801d16e787e5603015bc345", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/uclouvain-cbio/actions/runs/25480335821" }, { "r": "4.6.0", "os": "mac", "version": "0.1.19", "date": "2026-05-07T06:50:29.000Z", "commit": "3561033e7a99182664a0a20f603382b5539941f0", "fileid": "26bd9f546421da498bb7c681d953c833df8f595614ab2df0c92f15588c0282b3", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/uclouvain-cbio/actions/runs/25480335821" }, { "r": "4.7.0", "os": "win", "version": "0.1.19", "date": "2026-05-07T06:54:56.000Z", "commit": "3561033e7a99182664a0a20f603382b5539941f0", "fileid": "88bcd7a0eff32a150603e23925a34aa9737cdf84afe850c0d770b451f66ce104", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/uclouvain-cbio/actions/runs/25480335821" }, { "r": "4.5.3", "os": "win", "version": "0.1.19", "date": "2026-05-07T06:54:26.000Z", "commit": "3561033e7a99182664a0a20f603382b5539941f0", "fileid": "540551894ef324b84bcd6d4eadc14f1a69a1acb71e3330076c1a9105338ae482", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/uclouvain-cbio/actions/runs/25480335821" }, { "r": "4.6.0", "os": "win", "version": "0.1.19", "date": "2026-05-07T06:55:08.000Z", "commit": "3561033e7a99182664a0a20f603382b5539941f0", "fileid": "a9655b59c23edb6cefc5efc05f35ff37857dbb7b9e795b351dcc4d49cf23d952", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/uclouvain-cbio/actions/runs/25480335821" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.19", "date": "2026-05-22T15:06:55.000Z", "commit": "3561033e7a99182664a0a20f603382b5539941f0", "fileid": "24923a5c790258241c13dec9da2283e7475cd4e5937870d27598c0dfaf5b7b9f", "status": "success", "buildurl": "https://github.com/r-universe/uclouvain-cbio/actions/runs/25480335821" } ] }